Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sftpa1P35242 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.88□□□□□ -0.35
Sftpa1P35242 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sftpa1P35242 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Gm8598-201ENSMUST00000221184 836 ntBASIC12.88□□□□□ -0.35
Sftpa1P35242 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.88□□□□□ -0.35
Sftpa1P35242 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Sftpa1P35242 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Sftpa1P35242 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sftpa1P35242 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sftpa1P35242 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Sftpa1P35242 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sftpa1P35242 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.87□□□□□ -0.35
Sftpa1P35242 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.87□□□□□ -0.35
Sftpa1P35242 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.87□□□□□ -0.35
Sftpa1P35242 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.87□□□□□ -0.35
Sftpa1P35242 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sftpa1P35242 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.87□□□□□ -0.35
Sftpa1P35242 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sftpa1P35242 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sftpa1P35242 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sftpa1P35242 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm8810-201ENSMUST00000172895 754 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm27516-201ENSMUST00000184237 98 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm44397-201ENSMUST00000195950 113 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.86□□□□□ -0.35
Sftpa1P35242 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sftpa1P35242 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sftpa1P35242 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms