Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rom1P32958 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rom1P32958 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.07□□□□□ -0.64
Rom1P32958 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.06□□□□□ -0.64
Rom1P32958 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Grk6-205ENSMUST00000224653 2976 ntBASIC11.06□□□□□ -0.64
Rom1P32958 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.06□□□□□ -0.64
Rom1P32958 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.06□□□□□ -0.64
Rom1P32958 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.06□□□□□ -0.64
Rom1P32958 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.06□□□□□ -0.64
Rom1P32958 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rom1P32958 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.06□□□□□ -0.64
Rom1P32958 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rom1P32958 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Rom1P32958 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Rom1P32958 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rom1P32958 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Rom1P32958 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.05□□□□□ -0.64
Rom1P32958 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Gm7284-201ENSMUST00000131667 944 ntBASIC11.05□□□□□ -0.64
Rom1P32958 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Rom1P32958 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.05□□□□□ -0.64
Rom1P32958 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.05□□□□□ -0.64
Rom1P32958 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.05□□□□□ -0.64
Rom1P32958 Gm10154-201ENSMUST00000084445 354 ntBASIC11.05□□□□□ -0.64
Rom1P32958 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Rom1P32958 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rom1P32958 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rom1P32958 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.05□□□□□ -0.64
Rom1P32958 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rom1P32958 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rom1P32958 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms