Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Gm26927-201ENSMUST00000182385 965 ntBASIC15.67■□□□□ 0.1
Col2a1P28481 Gm27682-201ENSMUST00000183930 110 ntBASIC15.67■□□□□ 0.1
Col2a1P28481 Gm37922-201ENSMUST00000195596 455 ntBASIC15.67■□□□□ 0.1
Col2a1P28481 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col2a1P28481 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.67■□□□□ 0.1
Col2a1P28481 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.67■□□□□ 0.1
Col2a1P28481 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Col2a1P28481 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col2a1P28481 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col2a1P28481 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.66■□□□□ 0.1
Col2a1P28481 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Col2a1P28481 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Gm37497-201ENSMUST00000195830 798 ntBASIC15.66■□□□□ 0.1
Col2a1P28481 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col2a1P28481 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.66■□□□□ 0.1
Col2a1P28481 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col2a1P28481 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.66■□□□□ 0.1
Col2a1P28481 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col2a1P28481 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col2a1P28481 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm12384-201ENSMUST00000119228 919 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.65■□□□□ 0.1
Col2a1P28481 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col2a1P28481 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.65■□□□□ 0.1
Col2a1P28481 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.65■□□□□ 0.1
Col2a1P28481 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col2a1P28481 Gm10478-201ENSMUST00000084451 396 ntBASIC15.65■□□□□ 0.1
Col2a1P28481 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col2a1P28481 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.64■□□□□ 0.09
Col2a1P28481 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col2a1P28481 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col2a1P28481 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms