Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl6P27784 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.93□□□□□ -0.66
Ccl6P27784 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.93□□□□□ -0.66
Ccl6P27784 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl6P27784 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl6P27784 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ccl6P27784 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl6P27784 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Ccl6P27784 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl6P27784 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl6P27784 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl6P27784 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl6P27784 Gm13823-201ENSMUST00000119930 345 ntBASIC10.92□□□□□ -0.66
Ccl6P27784 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Ccl6P27784 Gm26308-201ENSMUST00000157768 69 ntBASIC10.92□□□□□ -0.66
Ccl6P27784 Gm24158-201ENSMUST00000175263 71 ntBASIC10.92□□□□□ -0.66
Ccl6P27784 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccl6P27784 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.92□□□□□ -0.66
Ccl6P27784 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccl6P27784 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl6P27784 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl6P27784 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl6P27784 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.91□□□□□ -0.66
Ccl6P27784 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.91□□□□□ -0.66
Ccl6P27784 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl6P27784 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl6P27784 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl6P27784 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Gm14701-201ENSMUST00000117156 348 ntBASIC10.91□□□□□ -0.66
Ccl6P27784 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl6P27784 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccl6P27784 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl6P27784 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccl6P27784 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.91□□□□□ -0.66
Ccl6P27784 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl6P27784 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl6P27784 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccl6P27784 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.9□□□□□ -0.66
Ccl6P27784 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl6P27784 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms