Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd40P27512 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cd40P27512 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cd40P27512 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Cd40P27512 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cd40P27512 Mir8102-201ENSMUST00000184148 139 ntBASIC12.66□□□□□ -0.38
Cd40P27512 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cd40P27512 Gm10576-201ENSMUST00000191927 825 ntBASIC12.66□□□□□ -0.38
Cd40P27512 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.66□□□□□ -0.38
Cd40P27512 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.66□□□□□ -0.38
Cd40P27512 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.66□□□□□ -0.38
Cd40P27512 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cd40P27512 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cd40P27512 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Cd40P27512 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Cd40P27512 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd40P27512 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cd40P27512 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd40P27512 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd40P27512 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd40P27512 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.65□□□□□ -0.38
Cd40P27512 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd40P27512 Mir497b-201ENSMUST00000093601 125 ntBASIC12.65□□□□□ -0.38
Cd40P27512 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd40P27512 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd40P27512 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd40P27512 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.39
Cd40P27512 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd40P27512 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd40P27512 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cd40P27512 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Mir698-201ENSMUST00000102164 109 ntBASIC12.64□□□□□ -0.39
Cd40P27512 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.64□□□□□ -0.39
Cd40P27512 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cd40P27512 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.64□□□□□ -0.39
Cd40P27512 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.64□□□□□ -0.39
Cd40P27512 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.64□□□□□ -0.39
Cd40P27512 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cd40P27512 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40P27512 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms