Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Gm14127-201ENSMUST00000117906 678 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Gm2495-201ENSMUST00000191160 466 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Prim1P20664 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.78■□□□□ 0.44
Prim1P20664 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.77■□□□□ 0.44
Prim1P20664 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Prim1P20664 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.77■□□□□ 0.44
Prim1P20664 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Prim1P20664 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.77■□□□□ 0.44
Prim1P20664 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Prim1P20664 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Prim1P20664 Gm15806-201ENSMUST00000120696 955 ntBASIC17.77■□□□□ 0.44
Prim1P20664 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.77■□□□□ 0.44
Prim1P20664 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.77■□□□□ 0.44
Prim1P20664 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC17.77■□□□□ 0.44
Prim1P20664 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prim1P20664 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prim1P20664 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prim1P20664 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Prim1P20664 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prim1P20664 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prim1P20664 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prim1P20664 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.76■□□□□ 0.43
Prim1P20664 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prim1P20664 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.76■□□□□ 0.43
Prim1P20664 Gm36943-201ENSMUST00000194422 282 ntBASIC17.76■□□□□ 0.43
Prim1P20664 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.76■□□□□ 0.43
Prim1P20664 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.76■□□□□ 0.43
Prim1P20664 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prim1P20664 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Prim1P20664 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC17.75■□□□□ 0.43
Prim1P20664 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Prim1P20664 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Prim1P20664 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prim1P20664 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prim1P20664 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms