Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf9P20334 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Paupar-201ENSMUST00000194826 3482 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Gm15321-201ENSMUST00000121290 288 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf9P20334 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf9P20334 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm11478-201ENSMUST00000117851 599 ntBASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm43377-201ENSMUST00000201640 455 ntBASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gm6180-201ENSMUST00000065243 498 ntBASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf9P20334 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms