Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.44□□□□□ -0.58
Sdc1P18828 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.44□□□□□ -0.58
Sdc1P18828 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.44□□□□□ -0.58
Sdc1P18828 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.44□□□□□ -0.58
Sdc1P18828 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.44□□□□□ -0.58
Sdc1P18828 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sdc1P18828 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.44□□□□□ -0.58
Sdc1P18828 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sdc1P18828 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sdc1P18828 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sdc1P18828 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sdc1P18828 Gm8097-201ENSMUST00000117903 829 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Gm11950-201ENSMUST00000121615 838 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.43□□□□□ -0.58
Sdc1P18828 Gm18489-201ENSMUST00000172565 551 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Gm37055-201ENSMUST00000191866 133 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sdc1P18828 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.43□□□□□ -0.58
Sdc1P18828 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc1P18828 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.43□□□□□ -0.58
Sdc1P18828 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Sdc1P18828 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc1P18828 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc1P18828 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.42□□□□□ -0.58
Sdc1P18828 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc1P18828 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.42□□□□□ -0.58
Sdc1P18828 Gm27646-201ENSMUST00000183989 110 ntBASIC11.42□□□□□ -0.58
Sdc1P18828 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.42□□□□□ -0.58
Sdc1P18828 Gm8520-201ENSMUST00000186517 868 ntBASIC11.42□□□□□ -0.58
Sdc1P18828 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc1P18828 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms