Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nid1P10493 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Nid1P10493 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nid1P10493 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Nid1P10493 Gm15693-201ENSMUST00000120470 637 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Gm11594-201ENSMUST00000122313 162 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.12□□□□□ -0.31
Nid1P10493 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Gm27397-201ENSMUST00000184997 107 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.12□□□□□ -0.31
Nid1P10493 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Chchd1-203ENSMUST00000224633 557 ntBASIC13.12□□□□□ -0.31
Nid1P10493 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.12□□□□□ -0.31
Nid1P10493 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nid1P10493 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nid1P10493 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nid1P10493 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nid1P10493 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nid1P10493 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nid1P10493 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nid1P10493 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nid1P10493 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.11□□□□□ -0.31
Nid1P10493 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.11□□□□□ -0.31
Nid1P10493 Gm28630-201ENSMUST00000187806 498 ntBASIC13.11□□□□□ -0.31
Nid1P10493 Gm10253-201ENSMUST00000194270 940 ntBASIC13.11□□□□□ -0.31
Nid1P10493 Gm6916-202ENSMUST00000205523 195 ntBASIC13.11□□□□□ -0.31
Nid1P10493 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.11□□□□□ -0.31
Nid1P10493 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nid1P10493 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nid1P10493 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nid1P10493 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nid1P10493 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.11□□□□□ -0.31
Nid1P10493 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nid1P10493 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nid1P10493 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.1□□□□□ -0.31
Nid1P10493 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Gm24543-201ENSMUST00000103867 82 ntBASIC13.1□□□□□ -0.31
Nid1P10493 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.1□□□□□ -0.31
Nid1P10493 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.1□□□□□ -0.31
Nid1P10493 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nid1P10493 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nid1P10493 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Nid1P10493 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms