Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm12644-201ENSMUST00000119935 606 ntBASIC10.84□□□□□ -0.67
Ccl1P10146 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccl1P10146 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccl1P10146 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm37153-201ENSMUST00000193637 231 ntBASIC10.84□□□□□ -0.67
Ccl1P10146 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccl1P10146 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccl1P10146 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm18246-201ENSMUST00000221023 728 ntBASIC10.84□□□□□ -0.67
Ccl1P10146 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.84□□□□□ -0.67
Ccl1P10146 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ccl1P10146 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.84□□□□□ -0.67
Ccl1P10146 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl1P10146 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccl1P10146 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccl1P10146 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccl1P10146 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccl1P10146 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccl1P10146 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl1P10146 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm9182-201ENSMUST00000217829 639 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.83□□□□□ -0.68
Ccl1P10146 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ccl1P10146 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms