Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NclP09405 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NclP09405 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NclP09405 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Gm11557-201ENSMUST00000120200 1008 ntBASIC20.72■□□□□ 0.91
NclP09405 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Gm8927-201ENSMUST00000181978 981 ntBASIC20.72■□□□□ 0.91
NclP09405 Gm27701-201ENSMUST00000184498 110 ntBASIC20.72■□□□□ 0.91
NclP09405 Gm18307-201ENSMUST00000206864 949 ntBASIC20.72■□□□□ 0.91
NclP09405 Gm3222-201ENSMUST00000071282 990 ntBASIC20.72■□□□□ 0.91
NclP09405 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NclP09405 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.72■□□□□ 0.91
NclP09405 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NclP09405 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC20.72■□□□□ 0.91
NclP09405 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 AC121801.1-201ENSMUST00000225363 1899 ntBASIC20.71■□□□□ 0.91
NclP09405 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.71■□□□□ 0.91
NclP09405 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NclP09405 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NclP09405 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NclP09405 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NclP09405 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NclP09405 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NclP09405 AC115735.4-201ENSMUST00000227460 1944 ntBASIC20.7■□□□□ 0.91
NclP09405 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Gm15806-201ENSMUST00000120696 955 ntBASIC20.7■□□□□ 0.9
NclP09405 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NclP09405 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Gm24420-201ENSMUST00000176676 59 ntBASIC20.7■□□□□ 0.9
NclP09405 Gm28911-201ENSMUST00000188837 117 ntBASIC20.7■□□□□ 0.9
NclP09405 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.7■□□□□ 0.9
NclP09405 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.7■□□□□ 0.9
NclP09405 Gm43433-201ENSMUST00000196573 481 ntBASIC20.7■□□□□ 0.9
NclP09405 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.7■□□□□ 0.9
NclP09405 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.7■□□□□ 0.9
NclP09405 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NclP09405 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC20.7■□□□□ 0.9
NclP09405 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NclP09405 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC20.69■□□□□ 0.9
NclP09405 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC20.69■□□□□ 0.9
NclP09405 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
NclP09405 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.69■□□□□ 0.9
NclP09405 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.69■□□□□ 0.9
NclP09405 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.69■□□□□ 0.9
NclP09405 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC20.69■□□□□ 0.9
NclP09405 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NclP09405 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC20.68■□□□□ 0.9
NclP09405 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.68■□□□□ 0.9
NclP09405 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.68■□□□□ 0.9
NclP09405 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms