Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06344 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
P06344 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P06344 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
P06344 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P06344 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.47□□□□□ -0.41
P06344 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.47□□□□□ -0.41
P06344 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
P06344 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.47□□□□□ -0.41
P06344 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.47□□□□□ -0.41
P06344 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.47□□□□□ -0.41
P06344 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.47□□□□□ -0.41
P06344 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.47□□□□□ -0.41
P06344 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P06344 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.41
P06344 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.46□□□□□ -0.41
P06344 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.46□□□□□ -0.41
P06344 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Gm7488-201ENSMUST00000117148 684 ntBASIC12.46□□□□□ -0.41
P06344 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.46□□□□□ -0.41
P06344 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.46□□□□□ -0.41
P06344 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.46□□□□□ -0.41
P06344 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
P06344 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
P06344 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
P06344 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06344 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
P06344 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.46□□□□□ -0.41
P06344 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.46□□□□□ -0.41
P06344 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
P06344 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.46□□□□□ -0.42
P06344 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
P06344 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06344 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
P06344 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P06344 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.45□□□□□ -0.42
P06344 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
P06344 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.45□□□□□ -0.42
P06344 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.45□□□□□ -0.42
P06344 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
P06344 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
P06344 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Gm21470-201ENSMUST00000187680 696 ntBASIC12.45□□□□□ -0.42
P06344 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.45□□□□□ -0.42
P06344 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06344 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms