Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PdgfrbP05622 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.16□□□□□ -0.14
PdgfrbP05622 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.16□□□□□ -0.14
PdgfrbP05622 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfrbP05622 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.15□□□□□ -0.14
PdgfrbP05622 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PdgfrbP05622 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm25144-201ENSMUST00000179561 110 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm25352-201ENSMUST00000179815 110 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm17837-201ENSMUST00000186435 985 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm46209-201ENSMUST00000217912 553 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Gm6888-201ENSMUST00000221983 706 ntBASIC14.15□□□□□ -0.14
PdgfrbP05622 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
PdgfrbP05622 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PdgfrbP05622 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PdgfrbP05622 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfrbP05622 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PdgfrbP05622 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Gm18027-201ENSMUST00000218947 619 ntBASIC14.14□□□□□ -0.15
PdgfrbP05622 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.14□□□□□ -0.15
PdgfrbP05622 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfrbP05622 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfrbP05622 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms