Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Igh-VJ558P01758 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igh-VJ558P01758 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igh-VJ558P01758 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Igh-VJ558P01758 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igh-VJ558P01758 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Gm27618-201ENSMUST00000183671 60 ntBASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Gm9229-201ENSMUST00000222777 126 ntBASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Mir497b-201ENSMUST00000093601 125 ntBASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.1□□□□□ -0.47
Igh-VJ558P01758 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igh-VJ558P01758 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm46209-201ENSMUST00000217912 553 ntBASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Igh-VJ558P01758 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Igh-VJ558P01758 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igh-VJ558P01758 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igh-VJ558P01758 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igh-VJ558P01758 Gm22175-201ENSMUST00000175007 78 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms