Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P01643 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.09□□□□□ -0.63
P01643 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
P01643 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
P01643 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.09□□□□□ -0.63
P01643 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.09□□□□□ -0.63
P01643 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
P01643 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.09□□□□□ -0.63
P01643 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01643 Gm27701-201ENSMUST00000184498 110 ntBASIC11.09□□□□□ -0.63
P01643 Gm28911-201ENSMUST00000188837 117 ntBASIC11.09□□□□□ -0.63
P01643 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.09□□□□□ -0.63
P01643 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.09□□□□□ -0.63
P01643 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.09□□□□□ -0.63
P01643 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.09□□□□□ -0.63
P01643 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01643 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01643 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01643 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.09□□□□□ -0.63
P01643 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P01643 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.09□□□□□ -0.63
P01643 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P01643 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
P01643 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
P01643 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01643 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm15678-201ENSMUST00000117573 960 ntBASIC11.08□□□□□ -0.64
P01643 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.08□□□□□ -0.64
P01643 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P01643 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
P01643 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm43433-201ENSMUST00000196573 481 ntBASIC11.08□□□□□ -0.64
P01643 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.08□□□□□ -0.64
P01643 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01643 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.08□□□□□ -0.64
P01643 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.08□□□□□ -0.64
P01643 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01643 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms