Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm17795-201ENSMUST00000214505 757 ntBASIC17.02■□□□□ 0.32
Setdb1O88974 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Setdb1O88974 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Setdb1O88974 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Setdb1O88974 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Setdb1O88974 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Setdb1O88974 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Setdb1O88974 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.02■□□□□ 0.32
Setdb1O88974 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Setdb1O88974 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Setdb1O88974 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Setdb1O88974 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Setdb1O88974 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Setdb1O88974 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.01■□□□□ 0.31
Setdb1O88974 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Gm4804-201ENSMUST00000182234 999 ntBASIC17.01■□□□□ 0.31
Setdb1O88974 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.01■□□□□ 0.31
Setdb1O88974 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Setdb1O88974 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Setdb1O88974 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Setdb1O88974 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.01■□□□□ 0.31
Setdb1O88974 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Setdb1O88974 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 Gm29649-201ENSMUST00000185649 419 ntBASIC17■□□□□ 0.31
Setdb1O88974 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17■□□□□ 0.31
Setdb1O88974 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 Gm17383-201ENSMUST00000078739 1041 ntBASIC17■□□□□ 0.31
Setdb1O88974 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17■□□□□ 0.31
Setdb1O88974 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17■□□□□ 0.31
Setdb1O88974 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17■□□□□ 0.31
Setdb1O88974 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Setdb1O88974 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17■□□□□ 0.31
Setdb1O88974 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.99■□□□□ 0.31
Setdb1O88974 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Gm12928-201ENSMUST00000117115 573 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.99■□□□□ 0.31
Setdb1O88974 Gm15429-201ENSMUST00000151268 798 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Gm16570-201ENSMUST00000161951 436 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Gm5425-201ENSMUST00000214125 459 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.99■□□□□ 0.31
Setdb1O88974 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Setdb1O88974 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Setdb1O88974 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms