Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hcn1O88704 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hcn1O88704 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Hcn1O88704 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.44□□□□□ -0.26
Hcn1O88704 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.44□□□□□ -0.26
Hcn1O88704 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.44□□□□□ -0.26
Hcn1O88704 Gm18049-201ENSMUST00000208909 581 ntBASIC13.44□□□□□ -0.26
Hcn1O88704 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.44□□□□□ -0.26
Hcn1O88704 Gm5779-201ENSMUST00000218467 910 ntBASIC13.44□□□□□ -0.26
Hcn1O88704 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Hcn1O88704 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.44□□□□□ -0.26
Hcn1O88704 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hcn1O88704 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.43□□□□□ -0.26
Hcn1O88704 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.43□□□□□ -0.26
Hcn1O88704 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm13015-201ENSMUST00000118674 204 ntBASIC13.43□□□□□ -0.26
Hcn1O88704 Gm15920-201ENSMUST00000118998 402 ntBASIC13.43□□□□□ -0.26
Hcn1O88704 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Hcn1O88704 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.43□□□□□ -0.26
Hcn1O88704 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.43□□□□□ -0.26
Hcn1O88704 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.43□□□□□ -0.26
Hcn1O88704 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hcn1O88704 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hcn1O88704 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.42□□□□□ -0.26
Hcn1O88704 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Mir6956-201ENSMUST00000183598 62 ntBASIC13.42□□□□□ -0.26
Hcn1O88704 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.42□□□□□ -0.26
Hcn1O88704 Gm9182-201ENSMUST00000217829 639 ntBASIC13.42□□□□□ -0.26
Hcn1O88704 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.42□□□□□ -0.26
Hcn1O88704 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.42□□□□□ -0.26
Hcn1O88704 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
Hcn1O88704 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hcn1O88704 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.42□□□□□ -0.26
Hcn1O88704 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms