Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vti1bO88384 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.37□□□□□ -0.27
Vti1bO88384 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vti1bO88384 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.36□□□□□ -0.27
Vti1bO88384 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.36□□□□□ -0.27
Vti1bO88384 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.36□□□□□ -0.27
Vti1bO88384 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.36□□□□□ -0.27
Vti1bO88384 Gm27920-201ENSMUST00000183953 96 ntBASIC13.36□□□□□ -0.27
Vti1bO88384 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Olfr286-202ENSMUST00000205305 969 ntBASIC13.36□□□□□ -0.27
Vti1bO88384 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.36□□□□□ -0.27
Vti1bO88384 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Vti1bO88384 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.36□□□□□ -0.27
Vti1bO88384 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.36□□□□□ -0.27
Vti1bO88384 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vti1bO88384 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vti1bO88384 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1bO88384 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vti1bO88384 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vti1bO88384 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.35□□□□□ -0.27
Vti1bO88384 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vti1bO88384 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vti1bO88384 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm13365-201ENSMUST00000121188 973 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm5479-201ENSMUST00000160578 435 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm6736-201ENSMUST00000166583 948 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1bO88384 Gm18737-201ENSMUST00000173594 937 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Gm27702-201ENSMUST00000184512 56 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.35□□□□□ -0.27
Vti1bO88384 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1bO88384 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Vti1bO88384 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Vti1bO88384 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vti1bO88384 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1bO88384 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vti1bO88384 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1bO88384 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1bO88384 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.34□□□□□ -0.27
Vti1bO88384 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vti1bO88384 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vti1bO88384 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.34□□□□□ -0.27
Vti1bO88384 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.34□□□□□ -0.27
Vti1bO88384 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1bO88384 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1bO88384 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms