Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.83□□□□□ -0.2
Pdlim1O70400 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.83□□□□□ -0.2
Pdlim1O70400 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.83□□□□□ -0.2
Pdlim1O70400 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.83□□□□□ -0.2
Pdlim1O70400 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.83□□□□□ -0.2
Pdlim1O70400 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm6912-201ENSMUST00000117218 544 ntBASIC13.82□□□□□ -0.2
Pdlim1O70400 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm24694-201ENSMUST00000180054 110 ntBASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm27663-201ENSMUST00000184839 110 ntBASIC13.82□□□□□ -0.2
Pdlim1O70400 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.82□□□□□ -0.2
Pdlim1O70400 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim1O70400 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Mir698-201ENSMUST00000102164 109 ntBASIC13.81□□□□□ -0.2
Pdlim1O70400 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm2445-201ENSMUST00000182798 989 ntBASIC13.81□□□□□ -0.2
Pdlim1O70400 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.81□□□□□ -0.2
Pdlim1O70400 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms