Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarce1O54941 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarce1O54941 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.62■□□□□ 0.25
Smarce1O54941 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarce1O54941 BC001981-202ENSMUST00000191393 1545 ntBASIC16.62■□□□□ 0.25
Smarce1O54941 Gm6222-201ENSMUST00000120787 396 ntBASIC16.62■□□□□ 0.25
Smarce1O54941 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarce1O54941 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Rprl2-201ENSMUST00000157150 290 ntBASIC16.62■□□□□ 0.25
Smarce1O54941 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarce1O54941 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.62■□□□□ 0.25
Smarce1O54941 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smarce1O54941 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarce1O54941 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarce1O54941 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.61■□□□□ 0.25
Smarce1O54941 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.61■□□□□ 0.25
Smarce1O54941 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarce1O54941 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smarce1O54941 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.61■□□□□ 0.25
Smarce1O54941 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Smarce1O54941 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarce1O54941 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.6■□□□□ 0.25
Smarce1O54941 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm13823-201ENSMUST00000119930 345 ntBASIC16.6■□□□□ 0.25
Smarce1O54941 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm27741-201ENSMUST00000185060 237 ntBASIC16.6■□□□□ 0.25
Smarce1O54941 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.6■□□□□ 0.25
Smarce1O54941 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smarce1O54941 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smarce1O54941 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smarce1O54941 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.6■□□□□ 0.25
Smarce1O54941 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.6■□□□□ 0.25
Smarce1O54941 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smarce1O54941 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarce1O54941 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms