Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac1O09106 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hdac1O09106 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hdac1O09106 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hdac1O09106 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hdac1O09106 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.64■□□□□ 0.25
Hdac1O09106 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.64■□□□□ 0.25
Hdac1O09106 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.64■□□□□ 0.25
Hdac1O09106 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Hdac1O09106 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.64■□□□□ 0.25
Hdac1O09106 Gm6222-201ENSMUST00000120787 396 ntBASIC16.64■□□□□ 0.25
Hdac1O09106 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 AA543401-201ENSMUST00000164248 1269 ntBASIC16.64■□□□□ 0.25
Hdac1O09106 Mir3113-201ENSMUST00000175478 76 ntBASIC16.64■□□□□ 0.25
Hdac1O09106 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.64■□□□□ 0.25
Hdac1O09106 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hdac1O09106 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.63■□□□□ 0.25
Hdac1O09106 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hdac1O09106 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.63■□□□□ 0.25
Hdac1O09106 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Gm29741-201ENSMUST00000192667 421 ntBASIC16.63■□□□□ 0.25
Hdac1O09106 Gm38225-201ENSMUST00000194001 393 ntBASIC16.63■□□□□ 0.25
Hdac1O09106 Gm44719-201ENSMUST00000206404 149 ntBASIC16.63■□□□□ 0.25
Hdac1O09106 Gm5364-201ENSMUST00000216789 889 ntBASIC16.63■□□□□ 0.25
Hdac1O09106 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.63■□□□□ 0.25
Hdac1O09106 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hdac1O09106 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Hdac1O09106 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.63■□□□□ 0.25
Hdac1O09106 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac1O09106 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hdac1O09106 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.62■□□□□ 0.25
Hdac1O09106 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.62■□□□□ 0.25
Hdac1O09106 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.62■□□□□ 0.25
Hdac1O09106 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.62■□□□□ 0.25
Hdac1O09106 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.62■□□□□ 0.25
Hdac1O09106 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.62■□□□□ 0.25
Hdac1O09106 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.62■□□□□ 0.25
Hdac1O09106 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac1O09106 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Hdac1O09106 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.61■□□□□ 0.25
Hdac1O09106 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac1O09106 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac1O09106 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac1O09106 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms