Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Gm45930-201ENSMUST00000221330 292 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Gm10268-201ENSMUST00000085340 555 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004C17RikJ3QP07 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004C17RikJ3QP07 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm12403-201ENSMUST00000121384 959 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm29608-201ENSMUST00000190444 463 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm37922-201ENSMUST00000195596 455 ntBASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004C17RikJ3QP07 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.49■□□□□ 0.07
B020004C17RikJ3QP07 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms