Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Gm15372-201ENSMUST00000120729 834 ntBASIC11.87□□□□□ -0.51
Gm3727J3QM54 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.87□□□□□ -0.51
Gm3727J3QM54 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.87□□□□□ -0.51
Gm3727J3QM54 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.87□□□□□ -0.51
Gm3727J3QM54 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3727J3QM54 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Gm11780-201ENSMUST00000136880 516 ntBASIC11.86□□□□□ -0.51
Gm3727J3QM54 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Gm18246-201ENSMUST00000221023 728 ntBASIC11.86□□□□□ -0.51
Gm3727J3QM54 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.86□□□□□ -0.51
Gm3727J3QM54 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3727J3QM54 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3727J3QM54 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3727J3QM54 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms