Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh1F7BJK1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh1F7BJK1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh1F7BJK1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Rpph1-201ENSMUST00000175096 319 ntBASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms