Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.4□□□□□ -0.11
Atf6F6VAN0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Atf6F6VAN0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Gm24543-201ENSMUST00000103867 82 ntBASIC14.39□□□□□ -0.11
Atf6F6VAN0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Atf6F6VAN0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.38□□□□□ -0.11
Atf6F6VAN0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm25948-201ENSMUST00000175334 112 ntBASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm28630-201ENSMUST00000187806 498 ntBASIC14.38□□□□□ -0.11
Atf6F6VAN0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm16476-201ENSMUST00000221544 139 ntBASIC14.38□□□□□ -0.11
Atf6F6VAN0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.38□□□□□ -0.11
Atf6F6VAN0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf6F6VAN0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.37□□□□□ -0.11
Atf6F6VAN0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.37□□□□□ -0.11
Atf6F6VAN0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms