Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm7857-201ENSMUST00000117957 358 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm27438-201ENSMUST00000183480 110 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm43378-201ENSMUST00000199336 582 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Ccdc85cE9Q6B2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gm20426-201ENSMUST00000173657 440 ntBASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gm45118-201ENSMUST00000208928 825 ntBASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc85cE9Q6B2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12616-201ENSMUST00000118594 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12624-201ENSMUST00000177615 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12621-201ENSMUST00000177760 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12615-201ENSMUST00000177970 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12622-201ENSMUST00000177975 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12627-201ENSMUST00000178412 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12625-201ENSMUST00000179122 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12614-201ENSMUST00000179586 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm12613-201ENSMUST00000180323 382 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms