Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm29741-201ENSMUST00000192667 421 ntBASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.85□□□□□ -0.51
Cpsf4lE9Q2N0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Mir497b-201ENSMUST00000093601 125 ntBASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4lE9Q2N0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cpsf4lE9Q2N0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm15487-201ENSMUST00000122373 465 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm2445-201ENSMUST00000182798 989 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Mir7023-201ENSMUST00000185093 64 ntBASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4lE9Q2N0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4lE9Q2N0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4lE9Q2N0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4lE9Q2N0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4lE9Q2N0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms