Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Gm11637-201ENSMUST00000120601 592 ntBASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hfm1D3Z4R1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm12363-201ENSMUST00000122250 668 ntBASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm9445-201ENSMUST00000207454 1285 ntBASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.29■□□□□ 0.68
Hfm1D3Z4R1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Gm4819-201ENSMUST00000182170 1009 ntBASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Morn2-202ENSMUST00000227729 656 ntBASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hfm1D3Z4R1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.27■□□□□ 0.68
Hfm1D3Z4R1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms