Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a6B1AVK5 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm15370-201ENSMUST00000117158 253 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a6B1AVK5 Gm24255-201ENSMUST00000104481 128 ntBASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm28693-202ENSMUST00000190758 331 ntBASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm18753-201ENSMUST00000201000 566 ntBASIC14.1□□□□□ -0.15
Col4a6B1AVK5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a6B1AVK5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Snord83b-201ENSMUST00000104546 94 ntBASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gm4986-201ENSMUST00000119731 549 ntBASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gm11978-201ENSMUST00000122315 466 ntBASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gm27320-201ENSMUST00000184892 109 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms