Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm7222-201ENSMUST00000117512 906 ntBASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Grk6-207ENSMUST00000225925 2769 ntBASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms