Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Mir3081-201ENSMUST00000175305 84 ntBASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Gm29518-201ENSMUST00000190858 372 ntBASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trav8-1A0A075B641 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav8-1A0A075B641 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms