Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Gm9229-201ENSMUST00000222777 126 ntBASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Mir497b-201ENSMUST00000093601 125 ntBASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.3□□□□□ -0.12
Gm5538W4VSP6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Gm14767-201ENSMUST00000121559 586 ntBASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5538W4VSP6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gm12151-201ENSMUST00000121374 290 ntBASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm5538W4VSP6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms