Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb2S4R1M3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb2S4R1M3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb2S4R1M3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.02□□□□□ -0.17
H2afb2S4R1M3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb2S4R1M3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms