Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm9824-201ENSMUST00000178707 561 ntBASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm18766-201ENSMUST00000189811 808 ntBASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm43125-201ENSMUST00000201724 730 ntBASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mbd1Q9Z2E2 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 AA543401-201ENSMUST00000164248 1269 ntBASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mbd1Q9Z2E2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Gm44335-201ENSMUST00000196879 141 ntBASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Gm44297-201ENSMUST00000198304 141 ntBASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Gm44346-201ENSMUST00000198851 141 ntBASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mbd1Q9Z2E2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms