Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm43433-201ENSMUST00000196573 481 ntBASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcb1Q9Z0H3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Gm26464-201ENSMUST00000157094 305 ntBASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcb1Q9Z0H3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms