Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Gm12882-201ENSMUST00000121696 517 ntBASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClcnkaQ9WUB7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm9719-201ENSMUST00000162765 543 ntBASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClcnkaQ9WUB7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClcnkaQ9WUB7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms