Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Mir698-201ENSMUST00000102164 109 ntBASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn8aQ9WTU3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14□□□□□ -0.17
Scn8aQ9WTU3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14□□□□□ -0.17
Scn8aQ9WTU3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14□□□□□ -0.17
Scn8aQ9WTU3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14□□□□□ -0.17
Scn8aQ9WTU3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn8aQ9WTU3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms