Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.67□□□□□ -0.22
Cdh17Q9R100 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Mir1895-201ENSMUST00000122615 79 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Mir125a-201ENSMUST00000083545 68 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.66□□□□□ -0.22
Cdh17Q9R100 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdh17Q9R100 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gm25287-201ENSMUST00000103846 110 ntBASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gm22918-201ENSMUST00000103855 110 ntBASIC13.65□□□□□ -0.22
Cdh17Q9R100 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gm13365-201ENSMUST00000121188 973 ntBASIC13.65□□□□□ -0.22
Cdh17Q9R100 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gm8000-201ENSMUST00000188378 592 ntBASIC13.65□□□□□ -0.22
Cdh17Q9R100 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.65□□□□□ -0.22
Cdh17Q9R100 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh17Q9R100 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdh17Q9R100 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms