Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm29705-201ENSMUST00000212598 474 ntBASIC16.35■□□□□ 0.21
Scn11aQ9R053 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Itm2b-204ENSMUST00000228637 783 ntBASIC16.35■□□□□ 0.21
Scn11aQ9R053 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.35■□□□□ 0.21
Scn11aQ9R053 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn11aQ9R053 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Gm7783-201ENSMUST00000204795 781 ntBASIC16.34■□□□□ 0.21
Scn11aQ9R053 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.34■□□□□ 0.21
Scn11aQ9R053 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn11aQ9R053 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.33■□□□□ 0.21
Scn11aQ9R053 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn11aQ9R053 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn11aQ9R053 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Mir686-201ENSMUST00000102174 109 ntBASIC16.33■□□□□ 0.2
Scn11aQ9R053 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Gm45930-201ENSMUST00000221330 292 ntBASIC16.33■□□□□ 0.2
Scn11aQ9R053 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn11aQ9R053 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.32■□□□□ 0.2
Scn11aQ9R053 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn11aQ9R053 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms