Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Gm29518-201ENSMUST00000190858 372 ntBASIC12.53□□□□□ -0.4
Trem1Q9JKE2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.53□□□□□ -0.4
Trem1Q9JKE2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trem1Q9JKE2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gm25745-201ENSMUST00000174945 133 ntBASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Mir3081-201ENSMUST00000175305 84 ntBASIC12.52□□□□□ -0.41
Trem1Q9JKE2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gm44454-201ENSMUST00000198541 138 ntBASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.52□□□□□ -0.41
Trem1Q9JKE2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms