Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ube4bQ9ES00 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ube4bQ9ES00 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ube4bQ9ES00 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Birc2-201ENSMUST00000054878 378 ntBASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ube4bQ9ES00 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ube4bQ9ES00 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Gm11780-201ENSMUST00000136880 516 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ube4bQ9ES00 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Gm6296-201ENSMUST00000222599 943 ntBASIC13.44□□□□□ -0.26
Ube4bQ9ES00 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ube4bQ9ES00 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms