Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Gm9908-201ENSMUST00000211534 448 ntBASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk4Q9ERK0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Gm19220-201ENSMUST00000222682 803 ntBASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ripk4Q9ERK0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk4Q9ERK0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk4Q9ERK0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk4Q9ERK0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms