Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm37230-201ENSMUST00000194491 818 ntBASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gm15693-201ENSMUST00000120470 637 ntBASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb3Q9ERD7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb3Q9ERD7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubb3Q9ERD7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms