Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm5566-201ENSMUST00000116118 459 ntBASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Gm38294-201ENSMUST00000192831 381 ntBASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne8Q9DC53 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gm44608-201ENSMUST00000206827 855 ntBASIC14.62□□□□□ -0.07
Cpne8Q9DC53 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne8Q9DC53 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm23935-201ENSMUST00000102303 57 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm24270-201ENSMUST00000102326 57 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm24245-201ENSMUST00000157318 57 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm27702-201ENSMUST00000184512 56 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpne8Q9DC53 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Gm28630-201ENSMUST00000187806 498 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms