Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdc40Q9DC48 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Gm9063-201ENSMUST00000223299 582 ntBASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdc40Q9DC48 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm11424-201ENSMUST00000121929 829 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm15487-201ENSMUST00000122373 465 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Mir1897-201ENSMUST00000122581 272 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm16215-201ENSMUST00000161990 637 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm5745-201ENSMUST00000183748 313 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Syt7-205ENSMUST00000224135 1557 ntBASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdc40Q9DC48 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.02□□□□□ -0.32
Cdc40Q9DC48 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Gm5566-201ENSMUST00000116118 459 ntBASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdc40Q9DC48 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.02□□□□□ -0.33
Cdc40Q9DC48 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms