Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3a3Q9D554 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Gm9682-201ENSMUST00000197505 556 ntBASIC14.19□□□□□ -0.14
Sf3a3Q9D554 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Sf3a3Q9D554 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Gm12644-201ENSMUST00000119935 606 ntBASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3a3Q9D554 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3a3Q9D554 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms