Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ssu72Q9CY97 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ssu72Q9CY97 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.9□□□□□ -0.18
Ssu72Q9CY97 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ssu72Q9CY97 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.9□□□□□ -0.19
Ssu72Q9CY97 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ssu72Q9CY97 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ssu72Q9CY97 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms