Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nip7Q9CXK8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nip7Q9CXK8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm11803-201ENSMUST00000119966 444 ntBASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.35■□□□□ 0.37
Nip7Q9CXK8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nip7Q9CXK8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm22331-201ENSMUST00000158066 136 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm27572-201ENSMUST00000183702 255 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm42550-201ENSMUST00000201553 960 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm18473-201ENSMUST00000220543 868 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Gm5161-201ENSMUST00000075243 853 ntBASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nip7Q9CXK8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms