Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Gm11452-201ENSMUST00000122376 690 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.65□□□□□ -0.38
Krt88Q9CPR6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Krt88Q9CPR6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Krt88Q9CPR6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Krt88Q9CPR6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt88Q9CPR6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms