Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Mir698-201ENSMUST00000102164 109 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm44397-201ENSMUST00000195950 113 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm38671-201ENSMUST00000200573 130 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm6091-201ENSMUST00000098307 165 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trim34aQ99PP6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim34aQ99PP6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.21■□□□□ 0.34
Trim34aQ99PP6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Trim34aQ99PP6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Snora78-201ENSMUST00000158630 128 ntBASIC17.2■□□□□ 0.34
Trim34aQ99PP6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim34aQ99PP6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Gm29649-201ENSMUST00000185649 419 ntBASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim34aQ99PP6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms